Arcus 1-2-3 - Wolfteam (1993). A Sega CD remake of the developer's PC trilogy. Outstanding character art but rather average otherwise, so in other words typical Wolfteam of the era
Legend of Mana (Square) - 1999. A Mana game made by the SaGa team, with an unusual structure, some gorgeous 2D visuals, and an excellent Yoko Shimomura soundtrack.
Tengai Makyou The Apocalypse IV. #1 on my wishlist of JRPGs that have yet to see any type of release in English. Its visuals are beautiful, and it's *incredibly* funny. I'm gonna post a whole lotta pics of these, from the PSP version.
Magic Knight Rayearth - Sega (1995). A 2D action-RPG based on the fantasy manga/anime by Clamp. An early Saturn release in Japan but one of the last titles to come out in the USA.
Arc the Lad II - G-Craft (1996). Using an SRPG-style battle system, this is a PS1 classic overlooked since it didn't receive an English release until six years later.